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Journal Articles - 2003   PDF Ranz, J. M., A. R. Ponce, D. L. Hartl, and D. Nurminsky, 2003 Origin and evolution of a new gene expressed in the Drosophila sperm axoneme. Genetica 118: 233-244.     PDF Townsend, J. P., D. Cavalieri, and Daniel L. Hartl, 2003 Population genetic variation in genome-wide gene expression. Mol. Biol. Evol. 20(6): 955-963.     PDF Ranz, J. M., C. I. Castillo-Davis, C. D. Meiklejohn, and D. L. Hartl, 2003 Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science 300: 1742-1745.     PDF Hartl, D. L., C. D. Meiklejohn, C. I. Castillo-Davis, D. Cavalieri, J. M. Ranz, and J. P. Townsend, 2003 Gene expression profiling in evolutionary genetics. In The Evolution of Population Biology: Modern Synthesis, Eds. R. Singh, S. Jain, and M. Uyenoyama. Cambridge University Press, Cambridge.     PDF Nielsen, K. M., J. Kasper, M. Choi, T. Bedford, K. Kristiansen, D. F. Wirth, S. K. Volkman, E. R. Lozovsky, and D. L. Hartl, 2003 Gene conversion as a source of nucleotide diversity in Plasmodium falciparum. Mol. Biol. Evol. 20: 726-734.     PDF Townsend, J. P., K. M. Nielsen, D. S. Fisher, and D. L. Hartl, 2003 Horizontal acquisition of divergent chromosomal DNA in bacteria: effects of mutator phenotypes. Genetics 164: 13-21.     PDF Castillo-Davis, C. I., and D. L. Hartl, 2003 GeneMerge--post-genomic analysis, data mining, and hypothesis testing. Bioinformatics 19(7): 891-892.     PDF Bustamante, C., R. Nielsen, and D. L. Hartl, 2003 Maximum likelihood and Bayesian methods for estimating the distribution of selective effects among classes of mutations using DNA polymorphism data. Theor. Pop. Biol. 63(2): 91-103.     PDF Volkman, S., and D. L. Hartl, 2003 A game of cat and mouth. Science 299: 353-354.     PDF Cavalieri, D., P. E. McGovern, D. L. Hartl, R. Mortimer, and M. Polsinelli. 2003. Evidence for S. cerevisiae fermentation in ancient wine. J. Mol. Evol. 57: S226-S232.     PDF Winzeler, E. A., C. I. Castillo-Davis, G. Oshiro, D. Liang, D. R. Richards, Y. Zhou, and D. L. Hartl, 2003 Genetic diversity in yeast assessed with whole-genome oligonucleotide arrays. Genetics 163: 79-89.