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*Papers selected by Faculty of 1000
Hoekstra Lab publications (2005-present):

  1. Mullen, L.M. and H.E. Hoekstra. (in press) Natural selection along an environmental gradient: a classic cline in mouse pigmentation. Evolution.
  2. Turner, L.M., E.B. Chuong and H.E. Hoekstra. (in press) Comparative analysis of testis protein evolution in rodents. Genetics.
  3. Abzhanov, A., C. Extavour, A. Groover, S. Hodges, H.E. Hoekstra, E.M. Kramer, A. Monteiro. (in press)  Are we there yet? Tracking the development of new model systems.  Trends in Genetics.
  4. Turner, L.M. and H.E. Hoekstra. (in press) Reproductive protein evolution within and between species: maintenance of divergent ZP3 alleles in Peromyscus. Molecular Ecology. early PDF
  5. Kay, E.H. and H.E. Hoekstra. (in press) Rodents. Current Biology.
  6. Turner, L.M. and H.E. Hoekstra. (in press) The evolution of reproductive proteins: causes and consequences. International Journal of Developmental Biology.
  7. Coyne, J.A. and H.E. Hoekstra. 2007. Evolution of protein expression: new genes for a new diet. Current Biology. 17:R1014-1016. PDF
  8. *Steiner, C.C., J.N. Weber and H.E. Hoekstra. 2007. Adaptive variation in beach mice caused by two interacting pigmentation genes. PLoS Biology. 5(9): 1880-1889. PDF
  9. *Hoekstra, H.E. and J.A. Coyne. 2007. The locus of evolution: evo devo and the genetics of adaptation.  Evolution. 61(5):995-1016. PDF
  10. Storz, J.F. and H.E. Hoekstra. 2007. The study of adaptation and speciation in the genomic era. Journal of Mammalogy. 88(1):1-4. PDF
  11. Stinchcombe, J.R. and H.E. Hoekstra. 2007. Population genomics and quantitative genetics: combined approaches for finding the genes underlying ecologically important traits. Heredity. 100:158-170. PDF
  12. Hoekstra, H.E. 2006. Genetics, development and evolution of adaptive pigmentation in vertebrates.  Heredity. 97:222-234. PDF
  13. Turner, L.M. and H.E. Hoekstra. 2006. Adaptive evolution of fertilization proteins within a genus: variation in ZP2 and ZP3 in deer mice (Peromyscus). Molecular Biology and Evolution. 23(9):1656-1669. PDF
  14. *Hoekstra, H.E., Hirschmann, R.J., Bundey, R.J., Insel, P. and J.P. Crossland. 2006. A single amino acid mutation contributes to adaptive color pattern in beach mice. Science. 313:101-104. PDF
  15. Mullen, L.M., Hirschmann, R.J., Prince, K.L., Glenn, T.C., Dewey, M.J. and H.E. Hoekstra. 2006. Sixty polymorphic microsatellite markers for the oldfield mouse developed in Peromyscus polionotus and P. maniculatus. Molecular Ecology Notes. 6:36-40. PDF
  16. *Payseur, B.A. and H.E. Hoekstra. 2005. Signature of reprodutive isolation in patterns of single nucleotide polymorphism across inbred strains of mice. Genetics. 171:1905-1916. PDF
Hoekstra publications (up to 2005):
  1. Hoekstra, H.E., Krenz, J.G.and M.W. Nachman. 2005. Local adaptation in the rock pocket mouse (Chaetodipus intermedius): natural selection and phylogenetic history of populations. Heredity. 94:217-228. PDF
  2. Hoekstra, H.E. and M.W. Nachman. 2005. Coat-color variation in rock pocket mice (Chaetodipus intermedius): from phenotype to genotype.  In Mammalian Diversification: from Chromosomes to Phylogeography, UC Press, Zoology. Vol. 133, pp.79- 99. PDF (Entire Volume PDF)
  3. Rosenblum, E.B, Hoekstra, H.E. and M.W. Nachman. 2004. Adaptive reptile color variation and the evolution of the MC1R gene.  Evolution. 58(8):1794-1808. PDF
  4. *Hoekstra, H.E., Drumm, K.E. and M.W. Nachman. 2004. Ecological genetics of adaptive color polymorphism in pocket mice: geographic variation in neutral and selected genes. Evolution. 58(6):1329-1341. PDF
  5. Hoekstra, H.E. and T. Price. 2004. Parallel evolution is in the genes. Science. 303:1779-1780. PDF (comment on Mundy et al. 2004 PDF)
  6. *Nachman, M.W., Hoekstra, H.E. and S. L. D’Agostino. 2003. The genetic basis of adaptive melanism in pocket mice.  PNAS. 100(9):5268-73. PDF (reviewed in Majerus & Mundy 2003 PDF)
  7. Hoekstra, H.E. and M.W. Nachman. 2003. Different genes underlie adaptive melanism in different populations of pocket mice.  Molecular Ecology. 12:1185-94. PDF.
  8. Hoekstra, H. E. 2003. Unequal transmission of mitochondrial haplotypes in natural populations of field mice with XY females (genus Akodon).  The American Naturalist. 161(1):29-39. PDF
  9. Hoekstra, H.E. and J.M. Hoekstra. 2001. An unusual sex-determination system in South American field mice (genus Akodon): the role of mutation, selection and meiotic drive in maintaining XY females. Evolution. 55(1):190-197. PDF
  10. Hoekstra, H.E., Hoekstra, J.M. Berrigan, D., Vigneri, S.N., Hill, C.E., Hoang, A, Beerli, P. and J.G. Kingsolver. 2001. Strength and tempo of directional selection in the wild. PNAS.  98(16):9157-9160. PDF
  11. Kingsolver, J.G., Hoekstra, H.E., Hoekstra, J.M. Berrigan, D., Vigneri, S.N., Hill, C.E., Hoang, A, Gibert, P. and P. Beerli. 2001. The strength of phenotypic selection in natural populations.  The American Naturalist. 157(3):245-261. PDF
  12. Lingenfelter, P.A., Delbridge, M.L., Thomas, S., Hoekstra, H.E., Mitchell, M., Graves, J.A.M and C.M. Disteche. 2001. Expression and conservation of processed copies of the RBMX gene.  Mammalian Genome. 12(7):538-545. PDF
  13. Hoekstra, H.E. and S.V. Edwards. 2000. Multiple origins of XY mice (genus Akodon): phylogenetic and chromosomal evidence. Proc. Roy. Soc. London B. 267(1445):1825-1831. PDF
  14. Hess, C.M., Gasper, J., Hoekstra, H.E., Hill, C.E. and S.V. Edwards. 2000. MHC class II pseudogene and genomic signature of a 32-kb cosmid in the house finch (Carpodacus mexicanus). Genome Research. 10(5):613-623.
  15. Hoekstra, H.E. and W.F. Fagan. 1998. Body size, dispersal ability and compositional disharmony: the carnivore dominated fauna of the Kuril Islands.  Diversity and Distributions. 4:135-149.
  16. Gunther, K.E. and H.E. Hoekstra. 1997. Bear-human interactions in Yellowstone National Park, 1972-1994. Ursus. 10:377-384.